PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS67749.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 189aa    MW: 21493.5 Da    PI: 8.4738
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS67749.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH185.3e-061101481255
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 R +r+ ++ + L++l+ +      +K + a++L +A+eYIk+L+
  EPS67749.1 110 RKERLGDRVNALQQLVSPF-----GKTDTASVLHEAIEYIKYLH 148
                 5566777778888888887.....8*****************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.68498147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-899154IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.09E-599151No hitNo description
SuperFamilySSF474592.22E-11103160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MIGGSEFIRP QTGFEISRRD SSSSPFFSTD AGGYCIWDQQ QQGYFRDLNS AVCMPPGNEI  60
PVRFLRSSEP PPYMPKASNF ISKEENQQEE TCKKEPPLKK RPRAAVLQVR KERLGDRVNA  120
LQQLVSPFGK TDTASVLHEA IEYIKYLHDQ LDVLLSSPYF KNKSHHHKQE GCLMSRGLCL  180
TPISVKDFI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003580620.12e-30PREDICTED: transcription factor bHLH112-like
SwissprotQ94JL31e-23BH112_ARATH; Transcription factor bHLH112
SwissprotQ9LT674e-24BH113_ARATH; Transcription factor bHLH113
TrEMBLS8CKM41e-141S8CKM4_9LAMI; Uncharacterized protein
STRINGBRADI5G22920.16e-30(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8602486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.13e-25bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]